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biotech// Computational Pharmacology

Drug response,
written in the genome.

We profile and elucidate the relationships between human genomes, haplotypes, and drug responses — turning genetic diversity into safer, more precise prescribing.

diversity_2
// Program 01

Haplotype-resolved pharmacogenomics

A population-scale atlas linking phased haplotypes to drug-metabolism phenotypes across diverse ancestries — capturing compound and population-specific effects that single-variant analyses miss.

online_prediction
// Program 02

Predicting adverse drug response

Interpretable machine-learning models that combine genome, haplotype, and clinical features to estimate individual risk of adverse drug reactions before a prescription is written.

medication
// Program 03

Tools for precision prescribing

Open software — adeRisk and personPsyMatch — that turns a pharmacogenomic profile into actionable, individualized prescribing guidance, with the genetic evidence surfaced rather than hidden.

adeRisk

2025

adeRisk scans an individual’s single-nucleotide variants across pharmacogenes andknown adverse-event loci, then stratifies a cohort into risk groups for a givendrug. It combines curated star-allele definitions with variant-level effectweights to estimate the probability that a patient falls into a high-risk groupfor a specific adverse drug reaction, producing a ranked report that cliniciansand researchers can act on.

Python MIT code_blocks

personPsyMatch

2024

personPsyMatch matches a patient’s pharmacogenomic profile againstmetabolizer-phenotype models for commonly prescribed psychoactive medications andreturns a ranked, individualized list of candidate drugs and dose considerations.Built as a decision-support aid for precision psychiatry, it surfaces the geneticevidence behind each recommendation rather than issuing a single opaque answer.

R GPL-3.0 code_blocks
// Featured paper · 2023 Clinical Pharmacology & Therapeutics

Impact of CYP2C:TG Haplotype on CYP2C19 Substrates Clearance In Vivo, Protein Content, and In Vitro Activity

Zubiaur P, Soria-Chacartegui P, Boone EC, et al.

link DOI